CNV Mapping:
Follow this link to download CNV Calls relevant to CAG CNV Mapping (Glessner et al. nature Communications, 2019. If you have questions, please feel free to get in touch with This email address is being protected from spambots. You need JavaScript enabled to view it..CAG Forms:
CAG Project Initiation Form: Please use this MS Word form to initiaite your project with CAG. Please save this form as a PDF and return to This email address is being protected from spambots. You need JavaScript enabled to view it., to whom you can also direct any questions.CAG DNA or RNA Sample Submission Form: Please use this MS Excel form to submit DNA or RNA samples to the CAG biorepository. In order for us to proceed with sample-processing, it is important that all fields be completed. If you have any questions, please contact This email address is being protected from spambots. You need JavaScript enabled to view it..
CAG Miscellaneous Sample Submission Form: Please use this MS Excel form to submit miscellaneous samples to the CAG biorepository. In order for us to proceed with sample-processing, it is important that all fields be completed. If you have any questions, please contact This email address is being protected from spambots. You need JavaScript enabled to view it..
CAG Blood Sample Submission Form: Please use this MS Excel form to submit blood samples to the CAG biorepository. In order for us to proceed with sample-processing, it is important that all fields be completed. If you have any questions, please contact This email address is being protected from spambots. You need JavaScript enabled to view it..
CAG Software:
- ANNOVAR ANNOVAR is an efficient software tool to functionally annotate genetic variants detected from diverse genomes (including human genome hg18, hg19, as well as mouse, worm, fly, yeast and many others).
- CAG Logo For researchers wishing to link to the CAG logo. CAG does not authorize the re-use, distribution, or modification of our logo in any way.
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GenGen
GenGen is a suite of free software tools to facilitate the analysis of high-throughput genomics data sets.
- ParseCNV ParseCNV CNV Call Association Software
- PennCNV PennCNV is a free software tool for Copy Number Variation (CNV) detection from SNP genotyping arrays. Currently it can handle signal intensity data from Illumina and Affymetrix arrays. With appropriate preparation of file format, it can also handle other types of SNP arrays and oligonucleotide arrays.
