Submission Guidelines:
Sequencing Submission Guidelines Please follow these guidelines for sequencing submission Feel free to contact This email address is being protected from spambots. You need JavaScript enabled to view it. with any questions.
Genotyping Submission Guidelines Please follow these guidelines for genotyping submission. Feel free to contact This email address is being protected from spambots. You need JavaScript enabled to view it. with any questions.
Methylation Submission Guidelines Please follow these guidelines for methylation submission. Feel free to contact This email address is being protected from spambots. You need JavaScript enabled to view it. with any questions.
CAG Forms:
CAG Project Initiation Form Please use this MS Word form to initiaite your project with CAG. Please save this form as a PDF and return to This email address is being protected from spambots. You need JavaScript enabled to view it., to whom you can also direct any questions.
CAG DNA Sample Submission Form Please use this MS Excel form to submit samples to the CAG biorepository. In order for us to proceed with sample-precessing, it is important that all fields be completed. If you have any questions, please contact This email address is being protected from spambots. You need JavaScript enabled to view it..
CAG Software:
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ANNOVAR
ANNOVAR is an efficient software tool to functionally annotate genetic variants detected from diverse genomes (including human genome hg18, hg19, as well as mouse, worm, fly, yeast and many others).
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CAG Logo
For researchers wishing to link to the CAG logo. CAG does not authorize the re-use, distribution, or modification of our logo in any way.
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GenGen
GenGen is a suite of free software tools to facilitate the analysis of high-throughput genomics data sets.
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ParseCNV
ParseCNV CNV Call Association Software
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PennCNV
PennCNV is a free software tool for Copy Number Variation (CNV) detection from SNP genotyping arrays. Currently it can handle signal intensity data from Illumina and Affymetrix arrays. With appropriate preparation of file format, it can also handle other types of SNP arrays and oligonucleotide arrays.
